Aptamer-ASO Chimera: Precision Delivery of Therapeutic Oligonucleotides for Targeted Gene Silencing

Technology Overview

Aptamer-ASO chimeras are innovative bifunctional oligonucleotide therapeutics that combine the high-affinity targeting of aptamers with the gene-silencing capabilities of antisense oligonucleotides (ASOs) [1]. This hybrid design enables precise delivery of ASOs to specific cells or tissues, enhancing therapeutic efficacy while minimizing off-target effects.

By leveraging aptamers’ ability to bind cell-surface biomarkers (e.g., receptors, proteins), the chimera selectively internalizes into target cells, where the ASO moiety modulates gene expression—either by degrading mRNA, blocking translation, or altering splicing [2]. This approach is particularly valuable for treating cancers, viral infections, and inflammatory diseases.

Key Advantages of Aptamer-ASO Chimeras

  • Targeted Delivery: Aptamers direct ASOs to diseased cells, reducing systemic toxicity [3].
  • Dual Functionality: Simultaneous target recognition (aptamer) and gene regulation (ASO) [1].
  • Enhanced Cellular Uptake: Engineered aptamers improve intracellular delivery efficiency [4].
  • Modular Design: Customizable for diverse targets (e.g., SARS-CoV-2, PD-L1, hematologic markers) [5].

Applications in Precision Medicine

1.Antiviral Therapy: Targeting SARS-CoV-2

A circular aptamer-ASO chimera suppressed SARS-CoV-2 replication and inflammation by targeting viral RNA and host factors [1].

2. Cancer Immunotherapy

PD-L1-targeting aptamer-ASO chimeras blocked immune checkpoint signals and downregulated oncogenes, demonstrating dual anti-tumor effects [4].

3.Hematologic Disorders

Aptamer-ASO chimeras delivered therapeutics to malignant blood cells with high specificity [5].

Design & Optimization Strategies

  • Aptamer Selection: Cell-internalizing aptamers (identified via SELEX) ensure efficient ASO delivery [3].
  • Linker Chemistry: Stable linkages (e.g., phosphodiester, circularized backbones) enhance chimera stability in vivo [1].
  • Base Modifications: Chemical tweaks (2’-F, 2’-OMe) improve nuclease resistance and binding affinity [2].

Future Directions in Aptamer-ASO Therapeutics

Advances in aptamer-ASO chimeras are expanding RNA therapeutics into precision medicine, with ongoing research focusing on:

  • Multivalent targeting for complex diseases [4].
  • Combination therapies (e.g., with siRNA or CRISPR) [2].
  • Clinical translation for unmet needs [5].

Our Aptamer-ASO Development Services

At BOC Sciences, we specialize in custom Aptamer-ASO design and optimization to accelerate your therapeutic development pipeline.

Our services include:

  • Rapid aptamer discovery and selection from our proprietary library.
  • Tailored ASO chemical modification for enhanced stability and potency.
  • Scalable production and GMP-grade manufacturing.
  • Preclinical validation support to fast-track your project toward regulatory approval.

Ready to Advance Your Targeted RNA Therapeutics?

Contact our expert team to explore how our Aptamer-ASO Chimera solutions can deliver your therapeutic payload with precision, efficiency, and reduced toxicity.

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References

  1. Efficient Targeted Delivery of Bifunctional Circular Aptamer-ASO Chimera to Suppress the SARS-CoV-2 Proliferation and Inflammation – Small (2023) DOI: 10.1002/smll.202207066
  2. Using aptamers for targeted delivery of RNA therapies – Molecular Therapy (2025) DOI: 10.1016/j.ymthe.2025.02.047
  3. Base-modified aptamers obtained by cell-internalization SELEX facilitate cellular uptake of an antisense oligonucleotide – Molecular Therapy – Nucleic Acids (2020) DOI: 10.1016/j.omtn.2020.11.016
  4. Anti-tumor effect of PD-L1-targeting antagonistic aptamer-ASO delivery system with dual inhibitory function in immunotherapy – Cell Chemical Biology (2023) DOI: 10.1016/j.chembiol.2023.10.010
  5. Aptamers and Antisense Oligonucleotides for Diagnosis and Treatment of Hematological Diseases – International Journal of Molecular Sciences (2020) DOI: 10.3390/ijms21093252